This is particularly evident with the Ft-M10 locus; SQ D = 0.32, K D = 0.77 (Table 1). One VNTR haplotype 10 7 4 30 predominated on Squibnocket. Almost a third (30.2%) of F. tularensis tularensis detected on this site has this single haplotype. The adaptive equilibria of these two natural foci were distinct, as measured by bacterial genetic diversity. Table 1 VNTR haplotypes LY333531 price found on Martha’s Vineyard

2003–2007. Squibnocket Katama M3 M10 M9 M2 total M3 M10 M9 M2 total 9 7 4 29–37 17 20 11 4 21–33 9 10 7 4 17–35 183 16 15 4 18–20 5 11 7 4 17–38 29 20 9 4 23–30 9 10 4 4 30–31 14 20 12 4 32–33 3 10 8 4 15–32 4 19 11 4 32 1 10 9 4 17 1 19 11 5 30 2 8 10 4 27 2 18 10 5 30–31 2 8 9 4 25–27 9 18 9 4 24 1 11 9 4 20–35

3 16 14 4 19–23 4 11 8 4 30–38 7 16 16 4 19 1 9 4 4 30 1 19 17 4 18 1 10 21 5 27 1 19 9 4 31 1 9 13 5 32–33 2           11 8 5 35 1           13 7 4 – 1           8 7 4 17 1           The population structure of F. tularensis tularensis within D. variabilis, as determined by MLVA, is consistent with a population that is evolving clonally. The population showed significant multilocus disequilibrium, (IA = 0.66, P = < 0.01). Furthermore, our data are consistent with the assertion that selleck compound F. tularensis tularensis from Squibnocket and Katama are reproductively isolated (test for population differentiation theta = 0.37, P < 0.01). The VNTR haplotypes from Squibnocket were unique from those originating in Katama (Table 1). Although the Ft-M2 and Ft-M9 loci had alleles common to both sites, the Ft-M3 alleles were completely unique and non-overlapping. We conclude that there has been little or no gene flow between the two natural foci. EBURST analysis of the Francisella tularensis tularensis populations from

each field site resulted in very different patterns. VNTR haplotypes from Squibnocket yielded a star diagram. Virtually all the samples could be linked to the putative founder, 10 7 30 (Figure 2A) and are likely to be direct descendents. Of 276 samples, only 12 were outliers that could not be traced back to the founder via single locus variants. EBURST calculated an 89% confidence in 10 7 30 as the founder. This is supported by the fact that this is the single most prevalent haplotype. In contrast, the depicted pattern of Katama is one with multiple groups and a great number of outliers that Farnesyltransferase could not be connected to any others by single locus variants (Figure 2). Three major groups were detected along with one doublet and 4 single outliers. Thus, the emergent Katama natural focus is derived from multiple founders and appears to not have had time for any effect of stabilizing selection. tularensis tularensis in nature has AZD6244 mouse heretofore been elusive because transmission appears to be unstable, unlike that of Type B (F.